fsl.wrappers.tbss

This module contains wrapper functions for various TBSS command-line tools.

fsl.wrappers.tbss.preproc(*images)

Wrapper for the tbss_1_preproc command. Usage: tbss_1_preproc(<image1>, <image2>, ...)

fsl.wrappers.tbss.reg(**kwargs)

Wrapper for the tbss_2_reg command. Refer to the tbss_2_reg command-line help for details on all arguments.

fsl.wrappers.tbss.postreg(**kwargs)

Wrapper for the tbss_3_postreg command. Refer to the tbss_3_postreg command-line help for details on all arguments.

fsl.wrappers.tbss.prestats(threshold)

Wrapper for the tbss_4_prestats command. The normal recommendation for <threshold> is 0.2

fsl.wrappers.tbss.non_FA(alt_img_root)

Wrapper for the tbss_non_FA command. e.g.: tbss_non_FA("L2")

fsl.wrappers.tbss.fill(stats_image, threshold, mean_FA, output, **kwargs)

Wrapper for the tbss_fill command. Refer to the tbss_fill command-line help for details on all arguments.